BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H04LP1|AL425937
(773 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig686 1526 0.0
>3x_Contig686
Length = 3201
Score = 1526 bits (770), Expect = 0.0
Identities = 772/773 (99%)
Strand = Plus / Plus
Query: 1 gatcaatacgcttcaatcctgcctttaacttcttatccttggttttcttctgcatcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 gatcaatacgcttcaatcctgcctttaacttcttatccttggttttcttctgcatcttgt 2185
Query: 61 gaganccgttggcatcatcatcgttattcgatctctcaaatttgtcctgattgtctctcc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 gagacccgttggcatcatcatcgttattcgatctctcaaatttgtcctgattgtctctcc 2245
Query: 121 gttgtaggtcactatactgtgacttactacctttcttagcaaccattattgaatattgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gttgtaggtcactatactgtgacttactacctttcttagcaaccattattgaatattgat 2305
Query: 181 tcggcttctcgtgaagtgatacctgatatcagaagatgtagcagtaaacttgcagaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 tcggcttctcgtgaagtgatacctgatatcagaagatgtagcagtaaacttgcagaacct 2365
Query: 241 tatattgtgaagctcatctcatctcatcgtttcttaaaattttcgatattggatactcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 tatattgtgaagctcatctcatctcatcgtttcttaaaattttcgatattggatactcga 2425
Query: 301 gaaaaaaagaaaaaatccttaagttgagctgaagaatgatagacattaccaagtaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 gaaaaaaagaaaaaatccttaagttgagctgaagaatgatagacattaccaagtaagaat 2485
Query: 361 tgtatatgactgataaatagatcaatcggcgcatagtacatgcccaaaacgtggggaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 tgtatatgactgataaatagatcaatcggcgcatagtacatgcccaaaacgtggggaaat 2545
Query: 421 tcagttataaataccaaacccaatgagtccaaacgatttctaaccaaaatagcaatcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546 tcagttataaataccaaacccaatgagtccaaacgatttctaaccaaaatagcaatcatt 2605
Query: 481 tcttcttgaaagagtagttaagagtagttccctgagtatttttcacttgatctgcatcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 tcttcttgaaagagtagttaagagtagttccctgagtatttttcacttgatctgcatcct 2665
Query: 541 gtagtaccggtgtaaagtagtatactaccttctatgcatctagacatatgataggtatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 gtagtaccggtgtaaagtagtatactaccttctatgcatctagacatatgataggtatct 2725
Query: 601 aaaagaaattaaatcaaagtacaaattaatatgcaatggtgacctctgagctaattgcac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2726 aaaagaaattaaatcaaagtacaaattaatatgcaatggtgacctctgagctaattgcac 2785
Query: 661 caggcatctgctagtcacatacttttgttcctcacagatgtgtttccggaaaacactccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2786 caggcatctgctagtcacatacttttgttcctcacagatgtgtttccggaaaacactccg 2845
Query: 721 tcgagtcttaactgaaaaatgaaatgaaaatgaagaacttgaactaatgtttt 773
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2846 tcgagtcttaactgaaaaatgaaatgaaaatgaagaacttgaactaatgtttt 2898
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7930
Number of Sequences: 1807
Number of extensions: 7930
Number of successful extensions: 310
Number of sequences better than 1.0e-20: 1
length of query: 773
length of database: 10,358,551
effective HSP length: 16
effective length of query: 757
effective length of database: 10,329,639
effective search space: 7819536723
effective search space used: 7819536723
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)